Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.06□□□□□ -0.32
Hmx3P42581 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Hmx3P42581 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.06□□□□□ -0.32
Hmx3P42581 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.06□□□□□ -0.32
Hmx3P42581 Gm30025-201ENSMUST00000218555 728 ntBASIC13.06□□□□□ -0.32
Hmx3P42581 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Hmx3P42581 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Hmx3P42581 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Hmx3P42581 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.06□□□□□ -0.32
Hmx3P42581 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Hmx3P42581 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Hmx3P42581 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Hmx3P42581 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Hmx3P42581 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.05□□□□□ -0.32
Hmx3P42581 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.05□□□□□ -0.32
Hmx3P42581 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.05□□□□□ -0.32
Hmx3P42581 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Hmx3P42581 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.05□□□□□ -0.32
Hmx3P42581 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.05□□□□□ -0.32
Hmx3P42581 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmx3P42581 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hmx3P42581 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Hmx3P42581 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.04□□□□□ -0.32
Hmx3P42581 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hmx3P42581 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hmx3P42581 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hmx3P42581 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.04□□□□□ -0.32
Hmx3P42581 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hmx3P42581 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Hmx3P42581 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.04□□□□□ -0.32
Hmx3P42581 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.04□□□□□ -0.32
Hmx3P42581 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hmx3P42581 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hmx3P42581 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.04□□□□□ -0.32
Hmx3P42581 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmx3P42581 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.03□□□□□ -0.32
Hmx3P42581 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Hmx3P42581 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmx3P42581 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms