Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sox6P40645 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.68□□□□□ -0.06
Sox6P40645 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sox6P40645 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.68□□□□□ -0.06
Sox6P40645 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Sox6P40645 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Sox6P40645 Gm29518-201ENSMUST00000190858 372 ntBASIC14.68□□□□□ -0.06
Sox6P40645 Gm17808-201ENSMUST00000200859 894 ntBASIC14.68□□□□□ -0.06
Sox6P40645 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.68□□□□□ -0.06
Sox6P40645 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Sox6P40645 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sox6P40645 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sox6P40645 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Sox6P40645 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sox6P40645 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Sox6P40645 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Sox6P40645 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sox6P40645 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Sox6P40645 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sox6P40645 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.67□□□□□ -0.06
Sox6P40645 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Sox6P40645 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox6P40645 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox6P40645 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox6P40645 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sox6P40645 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.66□□□□□ -0.06
Sox6P40645 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sox6P40645 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.66□□□□□ -0.06
Sox6P40645 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Sox6P40645 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox6P40645 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox6P40645 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox6P40645 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms