Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cxcl12P40224 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cxcl12P40224 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cxcl12P40224 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cxcl12P40224 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cxcl12P40224 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cxcl12P40224 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl12P40224 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl12P40224 Syt7-205ENSMUST00000224135 1557 ntBASIC16.01■□□□□ 0.15
Cxcl12P40224 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl12P40224 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Cxcl12P40224 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Cxcl12P40224 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl12P40224 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl12P40224 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.01■□□□□ 0.15
Cxcl12P40224 Gm2810-201ENSMUST00000118681 990 ntBASIC16.01■□□□□ 0.15
Cxcl12P40224 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Cxcl12P40224 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cxcl12P40224 Gm9794-201ENSMUST00000202370 423 ntBASIC16.01■□□□□ 0.15
Cxcl12P40224 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.01■□□□□ 0.15
Cxcl12P40224 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cxcl12P40224 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cxcl12P40224 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl12P40224 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl12P40224 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl12P40224 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cxcl12P40224 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16■□□□□ 0.15
Cxcl12P40224 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cxcl12P40224 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16■□□□□ 0.15
Cxcl12P40224 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16■□□□□ 0.15
Cxcl12P40224 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Cxcl12P40224 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cxcl12P40224 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16■□□□□ 0.15
Cxcl12P40224 Gm43433-201ENSMUST00000196573 481 ntBASIC16■□□□□ 0.15
Cxcl12P40224 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Cxcl12P40224 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cxcl12P40224 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.99■□□□□ 0.15
Cxcl12P40224 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.99■□□□□ 0.15
Cxcl12P40224 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cxcl12P40224 Gm8318-201ENSMUST00000182954 872 ntBASIC15.99■□□□□ 0.15
Cxcl12P40224 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.99■□□□□ 0.15
Cxcl12P40224 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.99■□□□□ 0.15
Cxcl12P40224 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cxcl12P40224 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Iqck-206ENSMUST00000208658 2891 ntBASIC15.99■□□□□ 0.15
Cxcl12P40224 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cxcl12P40224 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cxcl12P40224 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cxcl12P40224 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cxcl12P40224 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl12P40224 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl12P40224 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl12P40224 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl12P40224 Gm16215-201ENSMUST00000161990 637 ntBASIC15.98■□□□□ 0.15
Cxcl12P40224 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Cxcl12P40224 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.98■□□□□ 0.15
Cxcl12P40224 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl12P40224 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cxcl12P40224 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl12P40224 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.98■□□□□ 0.15
Cxcl12P40224 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl12P40224 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl12P40224 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Cxcl12P40224 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cxcl12P40224 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.98■□□□□ 0.15
Cxcl12P40224 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cxcl12P40224 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cxcl12P40224 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cxcl12P40224 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms