Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.42□□□□□ -0.1
Thbs1P35441 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs1P35441 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs1P35441 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs1P35441 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Thbs1P35441 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs1P35441 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs1P35441 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs1P35441 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs1P35441 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.41□□□□□ -0.1
Thbs1P35441 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Thbs1P35441 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs1P35441 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs1P35441 Gm12497-201ENSMUST00000138778 237 ntBASIC14.41□□□□□ -0.1
Thbs1P35441 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Thbs1P35441 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.41□□□□□ -0.1
Thbs1P35441 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.41□□□□□ -0.1
Thbs1P35441 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC14.41□□□□□ -0.1
Thbs1P35441 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.41□□□□□ -0.1
Thbs1P35441 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.41□□□□□ -0.1
Thbs1P35441 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.41□□□□□ -0.1
Thbs1P35441 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Thbs1P35441 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs1P35441 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.41□□□□□ -0.1
Thbs1P35441 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs1P35441 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs1P35441 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs1P35441 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.41□□□□□ -0.1
Thbs1P35441 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Thbs1P35441 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs1P35441 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Thbs1P35441 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs1P35441 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs1P35441 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Thbs1P35441 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Thbs1P35441 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Thbs1P35441 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.4□□□□□ -0.1
Thbs1P35441 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.4□□□□□ -0.1
Thbs1P35441 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Thbs1P35441 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.4□□□□□ -0.1
Thbs1P35441 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs1P35441 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.4□□□□□ -0.1
Thbs1P35441 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
Thbs1P35441 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Thbs1P35441 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Thbs1P35441 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Thbs1P35441 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.39□□□□□ -0.11
Thbs1P35441 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.39□□□□□ -0.11
Thbs1P35441 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Thbs1P35441 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.39□□□□□ -0.11
Thbs1P35441 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.39□□□□□ -0.11
Thbs1P35441 Gm14722-201ENSMUST00000118943 689 ntBASIC14.39□□□□□ -0.11
Thbs1P35441 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.39□□□□□ -0.11
Thbs1P35441 Gm25745-201ENSMUST00000174945 133 ntBASIC14.39□□□□□ -0.11
Thbs1P35441 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.39□□□□□ -0.11
Thbs1P35441 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.39□□□□□ -0.11
Thbs1P35441 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.39□□□□□ -0.11
Thbs1P35441 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.39□□□□□ -0.11
Thbs1P35441 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Thbs1P35441 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.39□□□□□ -0.11
Thbs1P35441 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Thbs1P35441 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs1P35441 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs1P35441 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Thbs1P35441 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms