Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sftpa1P35242 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.38□□□□□ -0.11
Sftpa1P35242 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Sftpa1P35242 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sftpa1P35242 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.37□□□□□ -0.11
Sftpa1P35242 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.37□□□□□ -0.11
Sftpa1P35242 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.37□□□□□ -0.11
Sftpa1P35242 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.37□□□□□ -0.11
Sftpa1P35242 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.37□□□□□ -0.11
Sftpa1P35242 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.37□□□□□ -0.11
Sftpa1P35242 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sftpa1P35242 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.37□□□□□ -0.11
Sftpa1P35242 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.37□□□□□ -0.11
Sftpa1P35242 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.37□□□□□ -0.11
Sftpa1P35242 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.37□□□□□ -0.11
Sftpa1P35242 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.37□□□□□ -0.11
Sftpa1P35242 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.37□□□□□ -0.11
Sftpa1P35242 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.37□□□□□ -0.11
Sftpa1P35242 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sftpa1P35242 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sftpa1P35242 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sftpa1P35242 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Sftpa1P35242 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sftpa1P35242 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sftpa1P35242 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sftpa1P35242 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sftpa1P35242 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sftpa1P35242 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sftpa1P35242 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sftpa1P35242 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sftpa1P35242 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.36□□□□□ -0.11
Sftpa1P35242 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sftpa1P35242 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sftpa1P35242 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.36□□□□□ -0.11
Sftpa1P35242 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.36□□□□□ -0.11
Sftpa1P35242 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sftpa1P35242 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sftpa1P35242 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sftpa1P35242 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sftpa1P35242 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sftpa1P35242 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sftpa1P35242 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.35□□□□□ -0.11
Sftpa1P35242 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sftpa1P35242 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sftpa1P35242 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.35□□□□□ -0.11
Sftpa1P35242 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.35□□□□□ -0.11
Sftpa1P35242 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sftpa1P35242 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.35□□□□□ -0.11
Sftpa1P35242 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.35□□□□□ -0.11
Sftpa1P35242 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Sftpa1P35242 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.35□□□□□ -0.11
Sftpa1P35242 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.35□□□□□ -0.11
Sftpa1P35242 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sftpa1P35242 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sftpa1P35242 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sftpa1P35242 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sftpa1P35242 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.34□□□□□ -0.11
Sftpa1P35242 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sftpa1P35242 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sftpa1P35242 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sftpa1P35242 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sftpa1P35242 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms