Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Vcam1P29533 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vcam1P29533 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Vcam1P29533 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Vcam1P29533 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcam1P29533 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vcam1P29533 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vcam1P29533 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcam1P29533 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcam1P29533 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.86■□□□□ 0.45
Vcam1P29533 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Vcam1P29533 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.85■□□□□ 0.45
Vcam1P29533 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.85■□□□□ 0.45
Vcam1P29533 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.85■□□□□ 0.45
Vcam1P29533 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Vcam1P29533 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vcam1P29533 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Vcam1P29533 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Vcam1P29533 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.84■□□□□ 0.45
Vcam1P29533 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Vcam1P29533 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.84■□□□□ 0.45
Vcam1P29533 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Vcam1P29533 Gm15920-201ENSMUST00000118998 402 ntBASIC17.84■□□□□ 0.45
Vcam1P29533 Gm2272-201ENSMUST00000194903 582 ntBASIC17.84■□□□□ 0.45
Vcam1P29533 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.84■□□□□ 0.45
Vcam1P29533 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.84■□□□□ 0.45
Vcam1P29533 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Vcam1P29533 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Vcam1P29533 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vcam1P29533 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Vcam1P29533 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vcam1P29533 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Vcam1P29533 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vcam1P29533 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.83■□□□□ 0.45
Vcam1P29533 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcam1P29533 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.83■□□□□ 0.44
Vcam1P29533 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.83■□□□□ 0.44
Vcam1P29533 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Vcam1P29533 Mir6990-201ENSMUST00000183724 91 ntBASIC17.83■□□□□ 0.44
Vcam1P29533 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.83■□□□□ 0.44
Vcam1P29533 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.83■□□□□ 0.44
Vcam1P29533 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.83■□□□□ 0.44
Vcam1P29533 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcam1P29533 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Vcam1P29533 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vcam1P29533 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcam1P29533 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcam1P29533 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.83■□□□□ 0.44
Vcam1P29533 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcam1P29533 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcam1P29533 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcam1P29533 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Vcam1P29533 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vcam1P29533 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Vcam1P29533 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Vcam1P29533 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.82■□□□□ 0.44
Vcam1P29533 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.82■□□□□ 0.44
Vcam1P29533 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Vcam1P29533 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.82■□□□□ 0.44
Vcam1P29533 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.82■□□□□ 0.44
Vcam1P29533 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.82■□□□□ 0.44
Vcam1P29533 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms