Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.66■□□□□ 0.26
Mmp3P28862 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Gm14722-201ENSMUST00000118943 689 ntBASIC16.66■□□□□ 0.26
Mmp3P28862 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.66■□□□□ 0.26
Mmp3P28862 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.66■□□□□ 0.26
Mmp3P28862 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Mmp3P28862 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.66■□□□□ 0.26
Mmp3P28862 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Gm45747-201ENSMUST00000212203 999 ntBASIC16.66■□□□□ 0.26
Mmp3P28862 Chchd1-203ENSMUST00000224633 557 ntBASIC16.66■□□□□ 0.26
Mmp3P28862 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Mmp3P28862 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Mmp3P28862 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp3P28862 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.65■□□□□ 0.26
Mmp3P28862 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.65■□□□□ 0.26
Mmp3P28862 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.65■□□□□ 0.26
Mmp3P28862 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.65■□□□□ 0.26
Mmp3P28862 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Mmp3P28862 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp3P28862 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Mmp3P28862 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.64■□□□□ 0.25
Mmp3P28862 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Mmp3P28862 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Mmp3P28862 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Mmp3P28862 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Mmp3P28862 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp3P28862 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp3P28862 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp3P28862 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Mmp3P28862 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp3P28862 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp3P28862 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp3P28862 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Mmp3P28862 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Mmp3P28862 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.63■□□□□ 0.25
Mmp3P28862 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp3P28862 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.63■□□□□ 0.25
Mmp3P28862 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.63■□□□□ 0.25
Mmp3P28862 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp3P28862 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.63■□□□□ 0.25
Mmp3P28862 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp3P28862 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Mmp3P28862 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp3P28862 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.63■□□□□ 0.25
Mmp3P28862 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Mmp3P28862 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp3P28862 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp3P28862 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Mmp3P28862 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Mmp3P28862 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms