Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tnfrsf1aP25118 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tnfrsf1aP25118 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Tnfrsf1aP25118 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tnfrsf1aP25118 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tnfrsf1aP25118 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfrsf1aP25118 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Gm13312-201ENSMUST00000119631 718 ntBASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Tnfrsf1aP25118 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf1aP25118 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Tnfrsf1aP25118 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf1aP25118 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf1aP25118 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf1aP25118 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf1aP25118 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf1aP25118 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf1aP25118 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf1aP25118 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfrsf1aP25118 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfrsf1aP25118 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms