Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.67■□□□□ 0.42
Kcna1P16388 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Kcna1P16388 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Kcna1P16388 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Kcna1P16388 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Kcna1P16388 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Kcna1P16388 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Kcna1P16388 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.66■□□□□ 0.42
Kcna1P16388 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.66■□□□□ 0.42
Kcna1P16388 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.66■□□□□ 0.42
Kcna1P16388 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Kcna1P16388 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Kcna1P16388 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Kcna1P16388 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.66■□□□□ 0.42
Kcna1P16388 Psmb5-202ENSMUST00000227257 622 ntBASIC17.66■□□□□ 0.42
Kcna1P16388 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Kcna1P16388 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Kcna1P16388 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.66■□□□□ 0.42
Kcna1P16388 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Kcna1P16388 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Kcna1P16388 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Kcna1P16388 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Kcna1P16388 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.66■□□□□ 0.42
Kcna1P16388 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.66■□□□□ 0.42
Kcna1P16388 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.65■□□□□ 0.42
Kcna1P16388 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Kcna1P16388 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Kcna1P16388 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Kcna1P16388 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.65■□□□□ 0.42
Kcna1P16388 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Kcna1P16388 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Kcna1P16388 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Kcna1P16388 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.65■□□□□ 0.42
Kcna1P16388 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.65■□□□□ 0.42
Kcna1P16388 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Kcna1P16388 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Kcna1P16388 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Kcna1P16388 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.65■□□□□ 0.42
Kcna1P16388 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Kcna1P16388 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Kcna1P16388 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Kcna1P16388 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Kcna1P16388 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Kcna1P16388 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Kcna1P16388 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.64■□□□□ 0.41
Kcna1P16388 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.64■□□□□ 0.41
Kcna1P16388 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.64■□□□□ 0.41
Kcna1P16388 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.64■□□□□ 0.41
Kcna1P16388 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.64■□□□□ 0.41
Kcna1P16388 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Kcna1P16388 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Kcna1P16388 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.63■□□□□ 0.41
Kcna1P16388 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.63■□□□□ 0.41
Kcna1P16388 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.63■□□□□ 0.41
Kcna1P16388 Gm9682-201ENSMUST00000197505 556 ntBASIC17.63■□□□□ 0.41
Kcna1P16388 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.63■□□□□ 0.41
Kcna1P16388 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Kcna1P16388 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Kcna1P16388 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Kcna1P16388 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Kcna1P16388 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms