Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.88■□□□□ 0.29
RaraP11416 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RaraP11416 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RaraP11416 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RaraP11416 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RaraP11416 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RaraP11416 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.88■□□□□ 0.29
RaraP11416 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.88■□□□□ 0.29
RaraP11416 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.88■□□□□ 0.29
RaraP11416 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.88■□□□□ 0.29
RaraP11416 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RaraP11416 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RaraP11416 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RaraP11416 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RaraP11416 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RaraP11416 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RaraP11416 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RaraP11416 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RaraP11416 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RaraP11416 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RaraP11416 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RaraP11416 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RaraP11416 Mir7071-201ENSMUST00000184847 69 ntBASIC16.87■□□□□ 0.29
RaraP11416 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.87■□□□□ 0.29
RaraP11416 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.87■□□□□ 0.29
RaraP11416 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RaraP11416 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.87■□□□□ 0.29
RaraP11416 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RaraP11416 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RaraP11416 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RaraP11416 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RaraP11416 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RaraP11416 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.86■□□□□ 0.29
RaraP11416 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RaraP11416 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RaraP11416 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RaraP11416 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.85■□□□□ 0.29
RaraP11416 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RaraP11416 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.85■□□□□ 0.29
RaraP11416 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.85■□□□□ 0.29
RaraP11416 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.85■□□□□ 0.29
RaraP11416 AA414768-201ENSMUST00000121924 1257 ntBASIC16.85■□□□□ 0.29
RaraP11416 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.85■□□□□ 0.29
RaraP11416 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RaraP11416 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RaraP11416 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RaraP11416 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RaraP11416 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms