Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PtcraP0C6B2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PtcraP0C6B2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Gm17971-201ENSMUST00000190239 806 ntBASIC13.55□□□□□ -0.24
PtcraP0C6B2 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.55□□□□□ -0.24
PtcraP0C6B2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.55□□□□□ -0.24
PtcraP0C6B2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.55□□□□□ -0.24
PtcraP0C6B2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
PtcraP0C6B2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PtcraP0C6B2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.54□□□□□ -0.24
PtcraP0C6B2 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.54□□□□□ -0.24
PtcraP0C6B2 Rps4l-201ENSMUST00000071745 943 ntBASIC13.54□□□□□ -0.24
PtcraP0C6B2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.54□□□□□ -0.24
PtcraP0C6B2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PtcraP0C6B2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Gm7153-201ENSMUST00000117092 455 ntBASIC13.53□□□□□ -0.24
PtcraP0C6B2 Gm11780-201ENSMUST00000136880 516 ntBASIC13.53□□□□□ -0.24
PtcraP0C6B2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.53□□□□□ -0.24
PtcraP0C6B2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PtcraP0C6B2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms