Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Mir6404-201ENSMUST00000183699 94 ntBASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Gm27459-201ENSMUST00000184860 107 ntBASIC16.98■□□□□ 0.31
Chmp6P0C0A3 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp6P0C0A3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Gm25406-201ENSMUST00000157599 105 ntBASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chmp6P0C0A3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.96■□□□□ 0.31
Chmp6P0C0A3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp6P0C0A3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp6P0C0A3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp6P0C0A3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp6P0C0A3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp6P0C0A3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp6P0C0A3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp6P0C0A3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp6P0C0A3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms