Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm10154-201ENSMUST00000084445 354 ntBASIC18.47■□□□□ 0.55
Col3a1P08121 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col3a1P08121 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col3a1P08121 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.47■□□□□ 0.55
Col3a1P08121 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col3a1P08121 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col3a1P08121 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col3a1P08121 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col3a1P08121 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col3a1P08121 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col3a1P08121 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col3a1P08121 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col3a1P08121 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col3a1P08121 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col3a1P08121 Gm13616-201ENSMUST00000120600 222 ntBASIC18.46■□□□□ 0.55
Col3a1P08121 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.46■□□□□ 0.55
Col3a1P08121 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Col3a1P08121 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.46■□□□□ 0.55
Col3a1P08121 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Col3a1P08121 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col3a1P08121 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col3a1P08121 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.46■□□□□ 0.55
Col3a1P08121 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Col3a1P08121 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col3a1P08121 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.46■□□□□ 0.54
Col3a1P08121 Gm22065-201ENSMUST00000103753 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm22066-201ENSMUST00000103761 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm24932-201ENSMUST00000103763 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm24115-201ENSMUST00000103799 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm22190-201ENSMUST00000103827 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm22191-201ENSMUST00000103831 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm24721-201ENSMUST00000103849 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm28018-201ENSMUST00000103869 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm26399-201ENSMUST00000103937 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.46■□□□□ 0.54
Col3a1P08121 Gm25349-201ENSMUST00000177728 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm23616-201ENSMUST00000177797 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm25871-201ENSMUST00000177816 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm24752-201ENSMUST00000178240 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm24496-201ENSMUST00000178287 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm25649-201ENSMUST00000178476 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm25548-201ENSMUST00000178681 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm23147-201ENSMUST00000178841 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm26095-201ENSMUST00000179270 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm22171-201ENSMUST00000179283 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm23936-201ENSMUST00000179354 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm22619-201ENSMUST00000179516 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm25255-201ENSMUST00000179579 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm24755-201ENSMUST00000179691 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm26506-201ENSMUST00000179692 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm25086-201ENSMUST00000179931 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm23243-201ENSMUST00000180047 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm24659-201ENSMUST00000180212 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm24169-201ENSMUST00000180244 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm23689-201ENSMUST00000180354 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm27359-201ENSMUST00000184153 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm27785-201ENSMUST00000184268 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm27466-201ENSMUST00000184396 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Gm27703-201ENSMUST00000184836 110 ntBASIC18.46■□□□□ 0.54
Col3a1P08121 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Col3a1P08121 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Col3a1P08121 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.46■□□□□ 0.54
Col3a1P08121 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Col3a1P08121 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Col3a1P08121 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col3a1P08121 Dancr-204ENSMUST00000132389 2347 ntBASIC18.45■□□□□ 0.54
Col3a1P08121 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col3a1P08121 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col3a1P08121 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Col3a1P08121 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.45■□□□□ 0.54
Col3a1P08121 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col3a1P08121 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Col3a1P08121 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Col3a1P08121 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.45■□□□□ 0.54
Col3a1P08121 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Col3a1P08121 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col3a1P08121 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Col3a1P08121 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col3a1P08121 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col3a1P08121 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col3a1P08121 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.45■□□□□ 0.54
Col3a1P08121 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Col3a1P08121 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.45■□□□□ 0.54
Col3a1P08121 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col3a1P08121 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col3a1P08121 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Col3a1P08121 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col3a1P08121 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.45■□□□□ 0.54
Col3a1P08121 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.44■□□□□ 0.54
Col3a1P08121 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col3a1P08121 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.44■□□□□ 0.54
Col3a1P08121 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Col3a1P08121 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.44■□□□□ 0.54
Col3a1P08121 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col3a1P08121 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Col3a1P08121 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.44■□□□□ 0.54
Col3a1P08121 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col3a1P08121 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col3a1P08121 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col3a1P08121 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms