Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.11■□□□□ 0.17
PrnpP04925 Gm16198-201ENSMUST00000118766 670 ntBASIC16.11■□□□□ 0.17
PrnpP04925 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.11■□□□□ 0.17
PrnpP04925 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PrnpP04925 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.11■□□□□ 0.17
PrnpP04925 Gm43125-201ENSMUST00000201724 730 ntBASIC16.11■□□□□ 0.17
PrnpP04925 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.11■□□□□ 0.17
PrnpP04925 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.11■□□□□ 0.17
PrnpP04925 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PrnpP04925 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.11■□□□□ 0.17
PrnpP04925 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PrnpP04925 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.1■□□□□ 0.17
PrnpP04925 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.1■□□□□ 0.17
PrnpP04925 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Gm9385-201ENSMUST00000117563 472 ntBASIC16.1■□□□□ 0.17
PrnpP04925 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.1■□□□□ 0.17
PrnpP04925 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.1■□□□□ 0.17
PrnpP04925 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PrnpP04925 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PrnpP04925 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
PrnpP04925 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PrnpP04925 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.09■□□□□ 0.17
PrnpP04925 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.09■□□□□ 0.17
PrnpP04925 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.09■□□□□ 0.17
PrnpP04925 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Gm10499-201ENSMUST00000174094 934 ntBASIC16.09■□□□□ 0.17
PrnpP04925 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.09■□□□□ 0.17
PrnpP04925 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.09■□□□□ 0.17
PrnpP04925 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.09■□□□□ 0.17
PrnpP04925 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.09■□□□□ 0.17
PrnpP04925 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PrnpP04925 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PrnpP04925 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PrnpP04925 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PrnpP04925 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PrnpP04925 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PrnpP04925 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PrnpP04925 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.08■□□□□ 0.16
PrnpP04925 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PrnpP04925 Gm25948-201ENSMUST00000175334 112 ntBASIC16.08■□□□□ 0.16
PrnpP04925 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PrnpP04925 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PrnpP04925 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PrnpP04925 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.08■□□□□ 0.16
PrnpP04925 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PrnpP04925 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PrnpP04925 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms