Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a1P02463 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a1P02463 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a1P02463 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a1P02463 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a1P02463 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a1P02463 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Col4a1P02463 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a1P02463 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a1P02463 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.01■□□□□ 0.63
Col4a1P02463 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a1P02463 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a1P02463 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.01■□□□□ 0.63
Col4a1P02463 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a1P02463 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a1P02463 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a1P02463 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a1P02463 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a1P02463 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col4a1P02463 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a1P02463 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a1P02463 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Col4a1P02463 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Col4a1P02463 Gm2810-201ENSMUST00000118681 990 ntBASIC19■□□□□ 0.63
Col4a1P02463 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col4a1P02463 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a1P02463 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a1P02463 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19■□□□□ 0.63
Col4a1P02463 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col4a1P02463 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a1P02463 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a1P02463 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
Col4a1P02463 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.99■□□□□ 0.63
Col4a1P02463 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.99■□□□□ 0.63
Col4a1P02463 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a1P02463 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a1P02463 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a1P02463 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a1P02463 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a1P02463 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.99■□□□□ 0.63
Col4a1P02463 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a1P02463 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a1P02463 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Col4a1P02463 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a1P02463 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.98■□□□□ 0.63
Col4a1P02463 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.98■□□□□ 0.63
Col4a1P02463 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.98■□□□□ 0.63
Col4a1P02463 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.98■□□□□ 0.63
Col4a1P02463 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
Col4a1P02463 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col4a1P02463 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col4a1P02463 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col4a1P02463 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.98■□□□□ 0.63
Col4a1P02463 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Col4a1P02463 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a1P02463 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a1P02463 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a1P02463 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a1P02463 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a1P02463 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a1P02463 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a1P02463 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a1P02463 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.97■□□□□ 0.63
Col4a1P02463 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a1P02463 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Col4a1P02463 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a1P02463 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a1P02463 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.97■□□□□ 0.63
Col4a1P02463 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a1P02463 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.96■□□□□ 0.63
Col4a1P02463 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Col4a1P02463 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Gm16026-204ENSMUST00000162652 683 ntBASIC18.96■□□□□ 0.63
Col4a1P02463 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.96■□□□□ 0.63
Col4a1P02463 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms