Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Hdac3O88895 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Hdac3O88895 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.98□□□□□ -0.17
Hdac3O88895 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.98□□□□□ -0.17
Hdac3O88895 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hdac3O88895 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 App-207ENSMUST00000227737 2827 ntBASIC13.98□□□□□ -0.17
Hdac3O88895 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.98□□□□□ -0.17
Hdac3O88895 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hdac3O88895 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hdac3O88895 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
Hdac3O88895 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.97□□□□□ -0.17
Hdac3O88895 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hdac3O88895 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hdac3O88895 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.97□□□□□ -0.17
Hdac3O88895 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hdac3O88895 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.96□□□□□ -0.17
Hdac3O88895 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.96□□□□□ -0.17
Hdac3O88895 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.96□□□□□ -0.17
Hdac3O88895 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Hdac3O88895 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Hdac3O88895 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hdac3O88895 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hdac3O88895 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hdac3O88895 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hdac3O88895 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hdac3O88895 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hdac3O88895 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.96□□□□□ -0.18
Hdac3O88895 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hdac3O88895 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hdac3O88895 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Hdac3O88895 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hdac3O88895 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hdac3O88895 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hdac3O88895 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.95□□□□□ -0.18
Hdac3O88895 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms