Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.25■□□□□ 0.83
Apaf1O88879 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Apaf1O88879 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Apaf1O88879 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.24■□□□□ 0.83
Apaf1O88879 Gm9682-201ENSMUST00000197505 556 ntBASIC20.24■□□□□ 0.83
Apaf1O88879 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Apaf1O88879 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC20.24■□□□□ 0.83
Apaf1O88879 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apaf1O88879 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Apaf1O88879 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apaf1O88879 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.23■□□□□ 0.83
Apaf1O88879 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apaf1O88879 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apaf1O88879 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Apaf1O88879 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.23■□□□□ 0.83
Apaf1O88879 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.23■□□□□ 0.83
Apaf1O88879 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apaf1O88879 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apaf1O88879 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Apaf1O88879 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Apaf1O88879 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apaf1O88879 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.23■□□□□ 0.83
Apaf1O88879 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Apaf1O88879 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC20.23■□□□□ 0.83
Apaf1O88879 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Apaf1O88879 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.22■□□□□ 0.83
Apaf1O88879 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.22■□□□□ 0.83
Apaf1O88879 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Apaf1O88879 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Apaf1O88879 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.22■□□□□ 0.83
Apaf1O88879 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC20.22■□□□□ 0.83
Apaf1O88879 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apaf1O88879 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Apaf1O88879 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Apaf1O88879 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.21■□□□□ 0.83
Apaf1O88879 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apaf1O88879 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Apaf1O88879 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Apaf1O88879 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Gm11779-201ENSMUST00000118541 368 ntBASIC20.2■□□□□ 0.82
Apaf1O88879 Gm14140-201ENSMUST00000119999 995 ntBASIC20.2■□□□□ 0.82
Apaf1O88879 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.2■□□□□ 0.82
Apaf1O88879 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.2■□□□□ 0.82
Apaf1O88879 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Apaf1O88879 Gm18489-201ENSMUST00000172565 551 ntBASIC20.2■□□□□ 0.82
Apaf1O88879 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.2■□□□□ 0.82
Apaf1O88879 Gm27300-201ENSMUST00000184085 97 ntBASIC20.2■□□□□ 0.82
Apaf1O88879 Gm27335-201ENSMUST00000184758 97 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms