Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tom1O88746 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Tom1O88746 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tom1O88746 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tom1O88746 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC20.51■□□□□ 0.87
Tom1O88746 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC20.51■□□□□ 0.87
Tom1O88746 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tom1O88746 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tom1O88746 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tom1O88746 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tom1O88746 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tom1O88746 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tom1O88746 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tom1O88746 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tom1O88746 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tom1O88746 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Tom1O88746 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tom1O88746 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tom1O88746 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tom1O88746 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC20.5■□□□□ 0.87
Tom1O88746 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC20.5■□□□□ 0.87
Tom1O88746 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC20.5■□□□□ 0.87
Tom1O88746 AC090659.2-201ENSMUST00000225378 1186 ntBASIC20.5■□□□□ 0.87
Tom1O88746 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tom1O88746 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tom1O88746 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Tom1O88746 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tom1O88746 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tom1O88746 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC20.5■□□□□ 0.87
Tom1O88746 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tom1O88746 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Tom1O88746 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tom1O88746 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tom1O88746 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tom1O88746 Gm5566-201ENSMUST00000116118 459 ntBASIC20.49■□□□□ 0.87
Tom1O88746 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC20.49■□□□□ 0.87
Tom1O88746 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tom1O88746 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tom1O88746 Gm9719-201ENSMUST00000162765 543 ntBASIC20.49■□□□□ 0.87
Tom1O88746 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Tom1O88746 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC20.49■□□□□ 0.87
Tom1O88746 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC20.49■□□□□ 0.87
Tom1O88746 AC154687.2-201ENSMUST00000223853 640 ntBASIC20.49■□□□□ 0.87
Tom1O88746 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tom1O88746 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tom1O88746 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tom1O88746 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tom1O88746 AC114008.2-201ENSMUST00000227699 1347 ntBASIC20.49■□□□□ 0.87
Tom1O88746 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tom1O88746 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tom1O88746 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Tom1O88746 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Tom1O88746 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Tom1O88746 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC20.48■□□□□ 0.87
Tom1O88746 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tom1O88746 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.47■□□□□ 0.87
Tom1O88746 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tom1O88746 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tom1O88746 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tom1O88746 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tom1O88746 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC20.47■□□□□ 0.87
Tom1O88746 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tom1O88746 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC20.47■□□□□ 0.87
Tom1O88746 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tom1O88746 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tom1O88746 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tom1O88746 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tom1O88746 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.47■□□□□ 0.87
Tom1O88746 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tom1O88746 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.47■□□□□ 0.87
Tom1O88746 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tom1O88746 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tom1O88746 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tom1O88746 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tom1O88746 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tom1O88746 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tom1O88746 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Tom1O88746 Gm18827-201ENSMUST00000188341 790 ntBASIC20.46■□□□□ 0.87
Tom1O88746 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC20.46■□□□□ 0.87
Tom1O88746 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC20.46■□□□□ 0.87
Tom1O88746 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC20.46■□□□□ 0.87
Tom1O88746 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC20.46■□□□□ 0.87
Tom1O88746 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC20.46■□□□□ 0.87
Tom1O88746 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tom1O88746 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Tom1O88746 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms