Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Psmc3O88685 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Psmc3O88685 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Psmc3O88685 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Psmc3O88685 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Psmc3O88685 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Psmc3O88685 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Psmc3O88685 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Psmc3O88685 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.45■□□□□ 0.22
Psmc3O88685 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.45■□□□□ 0.22
Psmc3O88685 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.45■□□□□ 0.22
Psmc3O88685 Gm44492-201ENSMUST00000197012 141 ntBASIC16.45■□□□□ 0.22
Psmc3O88685 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.45■□□□□ 0.22
Psmc3O88685 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.45■□□□□ 0.22
Psmc3O88685 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Psmc3O88685 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Psmc3O88685 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.45■□□□□ 0.22
Psmc3O88685 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Psmc3O88685 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.44■□□□□ 0.22
Psmc3O88685 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Psmc3O88685 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Psmc3O88685 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.44■□□□□ 0.22
Psmc3O88685 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Psmc3O88685 Gm15920-201ENSMUST00000118998 402 ntBASIC16.44■□□□□ 0.22
Psmc3O88685 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.44■□□□□ 0.22
Psmc3O88685 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.44■□□□□ 0.22
Psmc3O88685 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.44■□□□□ 0.22
Psmc3O88685 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Psmc3O88685 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Psmc3O88685 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Psmc3O88685 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Psmc3O88685 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Psmc3O88685 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Psmc3O88685 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Psmc3O88685 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Psmc3O88685 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Psmc3O88685 Gm11025-201ENSMUST00000140773 466 ntBASIC16.43■□□□□ 0.22
Psmc3O88685 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Psmc3O88685 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.43■□□□□ 0.22
Psmc3O88685 Gm9682-201ENSMUST00000197505 556 ntBASIC16.43■□□□□ 0.22
Psmc3O88685 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Psmc3O88685 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.43■□□□□ 0.22
Psmc3O88685 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Psmc3O88685 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Psmc3O88685 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Psmc3O88685 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Psmc3O88685 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Psmc3O88685 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Psmc3O88685 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Psmc3O88685 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Psmc3O88685 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Psmc3O88685 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc3O88685 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc3O88685 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Psmc3O88685 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms