Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.45□□□□□ -0.1
Cops4O88544 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.44□□□□□ -0.1
Cops4O88544 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Cops4O88544 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.44□□□□□ -0.1
Cops4O88544 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.44□□□□□ -0.1
Cops4O88544 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.44□□□□□ -0.1
Cops4O88544 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cops4O88544 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.44□□□□□ -0.1
Cops4O88544 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops4O88544 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cops4O88544 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.44□□□□□ -0.1
Cops4O88544 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.43□□□□□ -0.1
Cops4O88544 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.43□□□□□ -0.1
Cops4O88544 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.43□□□□□ -0.1
Cops4O88544 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cops4O88544 Gm13436-201ENSMUST00000120418 567 ntBASIC14.43□□□□□ -0.1
Cops4O88544 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.43□□□□□ -0.1
Cops4O88544 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cops4O88544 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cops4O88544 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.43□□□□□ -0.1
Cops4O88544 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops4O88544 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.43□□□□□ -0.1
Cops4O88544 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.43□□□□□ -0.1
Cops4O88544 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.42□□□□□ -0.1
Cops4O88544 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.42□□□□□ -0.1
Cops4O88544 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cops4O88544 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.42□□□□□ -0.1
Cops4O88544 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cops4O88544 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cops4O88544 Gm7213-201ENSMUST00000215977 950 ntBASIC14.42□□□□□ -0.1
Cops4O88544 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.42□□□□□ -0.1
Cops4O88544 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops4O88544 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cops4O88544 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cops4O88544 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cops4O88544 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms