Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cops3O88543 Gm29340-201ENSMUST00000188763 3854 ntBASIC14□□□□□ -0.17
Cops3O88543 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14□□□□□ -0.17
Cops3O88543 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cops3O88543 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Gm11355-201ENSMUST00000121120 306 ntBASIC14□□□□□ -0.17
Cops3O88543 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14□□□□□ -0.17
Cops3O88543 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14□□□□□ -0.17
Cops3O88543 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cops3O88543 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cops3O88543 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cops3O88543 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.99□□□□□ -0.17
Cops3O88543 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.99□□□□□ -0.17
Cops3O88543 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.99□□□□□ -0.17
Cops3O88543 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.99□□□□□ -0.17
Cops3O88543 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cops3O88543 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cops3O88543 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.99□□□□□ -0.17
Cops3O88543 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.99□□□□□ -0.17
Cops3O88543 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cops3O88543 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Cops3O88543 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cops3O88543 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops3O88543 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.98□□□□□ -0.17
Cops3O88543 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.98□□□□□ -0.17
Cops3O88543 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Sybu-209ENSMUST00000228639 4113 ntBASIC13.98□□□□□ -0.17
Cops3O88543 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.98□□□□□ -0.17
Cops3O88543 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.98□□□□□ -0.17
Cops3O88543 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cops3O88543 Gm18101-201ENSMUST00000215769 548 ntBASIC13.98□□□□□ -0.17
Cops3O88543 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cops3O88543 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.98□□□□□ -0.17
Cops3O88543 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
Cops3O88543 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops3O88543 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Cops3O88543 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Cops3O88543 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.97□□□□□ -0.17
Cops3O88543 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Mir770-201ENSMUST00000103252 94 ntBASIC13.97□□□□□ -0.17
Cops3O88543 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms