Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.92□□□□□ -0.02
Vti1bO88384 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Vti1bO88384 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.92□□□□□ -0.02
Vti1bO88384 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Vti1bO88384 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.91□□□□□ -0.02
Vti1bO88384 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Vti1bO88384 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.91□□□□□ -0.02
Vti1bO88384 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Vti1bO88384 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.91□□□□□ -0.02
Vti1bO88384 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Vti1bO88384 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.91□□□□□ -0.02
Vti1bO88384 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.91□□□□□ -0.02
Vti1bO88384 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.91□□□□□ -0.02
Vti1bO88384 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Vti1bO88384 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Vti1bO88384 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vti1bO88384 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Vti1bO88384 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Vti1bO88384 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Vti1bO88384 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Vti1bO88384 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Vti1bO88384 Gm36967-201ENSMUST00000193814 266 ntBASIC14.9□□□□□ -0.02
Vti1bO88384 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.9□□□□□ -0.02
Vti1bO88384 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.9□□□□□ -0.02
Vti1bO88384 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Vti1bO88384 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vti1bO88384 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vti1bO88384 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Vti1bO88384 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Vti1bO88384 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vti1bO88384 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vti1bO88384 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vti1bO88384 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vti1bO88384 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Vti1bO88384 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Vti1bO88384 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vti1bO88384 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vti1bO88384 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vti1bO88384 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vti1bO88384 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vti1bO88384 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vti1bO88384 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vti1bO88384 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
Vti1bO88384 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Vti1bO88384 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.88□□□□□ -0.03
Vti1bO88384 Gm33142-201ENSMUST00000193913 867 ntBASIC14.88□□□□□ -0.03
Vti1bO88384 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vti1bO88384 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms