Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.39■□□□□ 0.05
Pdlim1O70400 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Pdlim1O70400 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pdlim1O70400 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.39■□□□□ 0.05
Pdlim1O70400 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pdlim1O70400 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.39■□□□□ 0.05
Pdlim1O70400 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.39■□□□□ 0.05
Pdlim1O70400 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.39■□□□□ 0.05
Pdlim1O70400 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pdlim1O70400 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pdlim1O70400 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pdlim1O70400 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Pdlim1O70400 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.38■□□□□ 0.05
Pdlim1O70400 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.38■□□□□ 0.05
Pdlim1O70400 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.38■□□□□ 0.05
Pdlim1O70400 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Pdlim1O70400 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pdlim1O70400 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 Gm11764-201ENSMUST00000120221 623 ntBASIC15.37■□□□□ 0.05
Pdlim1O70400 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 Gm6550-201ENSMUST00000187574 993 ntBASIC15.37■□□□□ 0.05
Pdlim1O70400 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Pdlim1O70400 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pdlim1O70400 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.37■□□□□ 0.05
Pdlim1O70400 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pdlim1O70400 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pdlim1O70400 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.37■□□□□ 0.05
Pdlim1O70400 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.36■□□□□ 0.05
Pdlim1O70400 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Pdlim1O70400 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.36■□□□□ 0.05
Pdlim1O70400 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
Pdlim1O70400 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.36■□□□□ 0.05
Pdlim1O70400 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pdlim1O70400 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Pdlim1O70400 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms