Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
SncaO55042 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SncaO55042 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.94□□□□□ -0.34
SncaO55042 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.94□□□□□ -0.34
SncaO55042 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.94□□□□□ -0.34
SncaO55042 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SncaO55042 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SncaO55042 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SncaO55042 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SncaO55042 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SncaO55042 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
SncaO55042 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.93□□□□□ -0.34
SncaO55042 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.93□□□□□ -0.34
SncaO55042 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SncaO55042 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SncaO55042 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
SncaO55042 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SncaO55042 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SncaO55042 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SncaO55042 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.92□□□□□ -0.34
SncaO55042 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SncaO55042 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.92□□□□□ -0.34
SncaO55042 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SncaO55042 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
SncaO55042 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.92□□□□□ -0.34
SncaO55042 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.92□□□□□ -0.34
SncaO55042 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.92□□□□□ -0.34
SncaO55042 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SncaO55042 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.92□□□□□ -0.34
SncaO55042 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SncaO55042 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SncaO55042 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SncaO55042 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SncaO55042 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SncaO55042 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaO55042 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SncaO55042 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
SncaO55042 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SncaO55042 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaO55042 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SncaO55042 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.91□□□□□ -0.34
SncaO55042 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaO55042 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaO55042 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SncaO55042 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.91□□□□□ -0.34
SncaO55042 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SncaO55042 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms