Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Banf1O54962 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Banf1O54962 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Banf1O54962 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Banf1O54962 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Banf1O54962 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.89■□□□□ 0.13
Banf1O54962 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Banf1O54962 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Banf1O54962 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Banf1O54962 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.89■□□□□ 0.13
Banf1O54962 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Banf1O54962 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Banf1O54962 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Banf1O54962 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Banf1O54962 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.88■□□□□ 0.13
Banf1O54962 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Gm11950-201ENSMUST00000121615 838 ntBASIC15.88■□□□□ 0.13
Banf1O54962 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Gm17808-201ENSMUST00000200859 894 ntBASIC15.88■□□□□ 0.13
Banf1O54962 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Banf1O54962 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Banf1O54962 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.88■□□□□ 0.13
Banf1O54962 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Banf1O54962 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Banf1O54962 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Banf1O54962 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.87■□□□□ 0.13
Banf1O54962 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Banf1O54962 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.87■□□□□ 0.13
Banf1O54962 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Banf1O54962 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Banf1O54962 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.87■□□□□ 0.13
Banf1O54962 Gm15794-201ENSMUST00000120182 631 ntBASIC15.87■□□□□ 0.13
Banf1O54962 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Banf1O54962 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Banf1O54962 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.87■□□□□ 0.13
Banf1O54962 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Banf1O54962 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Banf1O54962 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Banf1O54962 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Banf1O54962 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.87■□□□□ 0.13
Banf1O54962 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Banf1O54962 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Banf1O54962 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Banf1O54962 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Banf1O54962 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.86■□□□□ 0.13
Banf1O54962 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.86■□□□□ 0.13
Banf1O54962 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.86■□□□□ 0.13
Banf1O54962 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.86■□□□□ 0.13
Banf1O54962 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Banf1O54962 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Banf1O54962 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms