Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.13□□□□□ -0.31
Ccr6O54689 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccr6O54689 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ccr6O54689 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccr6O54689 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.13□□□□□ -0.31
Ccr6O54689 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.13□□□□□ -0.31
Ccr6O54689 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccr6O54689 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccr6O54689 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccr6O54689 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccr6O54689 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccr6O54689 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccr6O54689 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccr6O54689 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ccr6O54689 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccr6O54689 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccr6O54689 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.11□□□□□ -0.31
Ccr6O54689 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Ccr6O54689 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ccr6O54689 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Gm15378-201ENSMUST00000121894 207 ntBASIC13.11□□□□□ -0.31
Ccr6O54689 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.11□□□□□ -0.31
Ccr6O54689 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccr6O54689 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.11□□□□□ -0.31
Ccr6O54689 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccr6O54689 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccr6O54689 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ccr6O54689 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.11□□□□□ -0.31
Ccr6O54689 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
Ccr6O54689 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccr6O54689 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.1□□□□□ -0.31
Ccr6O54689 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccr6O54689 Gm6257-201ENSMUST00000163864 910 ntBASIC13.1□□□□□ -0.31
Ccr6O54689 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.1□□□□□ -0.31
Ccr6O54689 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccr6O54689 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.1□□□□□ -0.31
Ccr6O54689 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.1□□□□□ -0.31
Ccr6O54689 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms