Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Alx4O35137 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Alx4O35137 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.92□□□□□ -0.18
Alx4O35137 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx4O35137 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Alx4O35137 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.91□□□□□ -0.18
Alx4O35137 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.91□□□□□ -0.18
Alx4O35137 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.91□□□□□ -0.18
Alx4O35137 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.91□□□□□ -0.18
Alx4O35137 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.91□□□□□ -0.18
Alx4O35137 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Alx4O35137 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.91□□□□□ -0.18
Alx4O35137 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.91□□□□□ -0.18
Alx4O35137 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Alx4O35137 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.91□□□□□ -0.18
Alx4O35137 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Alx4O35137 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.9□□□□□ -0.18
Alx4O35137 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Alx4O35137 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.9□□□□□ -0.18
Alx4O35137 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.9□□□□□ -0.18
Alx4O35137 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.9□□□□□ -0.18
Alx4O35137 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.9□□□□□ -0.18
Alx4O35137 Gm7889-201ENSMUST00000185591 958 ntBASIC13.9□□□□□ -0.18
Alx4O35137 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.9□□□□□ -0.18
Alx4O35137 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.9□□□□□ -0.18
Alx4O35137 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.9□□□□□ -0.18
Alx4O35137 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.9□□□□□ -0.18
Alx4O35137 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
Alx4O35137 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx4O35137 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Alx4O35137 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Alx4O35137 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.9□□□□□ -0.19
Alx4O35137 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Sybu-209ENSMUST00000228639 4113 ntBASIC13.89□□□□□ -0.19
Alx4O35137 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Alx4O35137 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Alx4O35137 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Alx4O35137 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.89□□□□□ -0.19
Alx4O35137 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.89□□□□□ -0.19
Alx4O35137 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Alx4O35137 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms