Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.54□□□□□ -0.4
Ndufb11O09111 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.54□□□□□ -0.4
Ndufb11O09111 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ndufb11O09111 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ndufb11O09111 Gm13234-201ENSMUST00000120010 747 ntBASIC12.54□□□□□ -0.4
Ndufb11O09111 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.54□□□□□ -0.4
Ndufb11O09111 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.54□□□□□ -0.4
Ndufb11O09111 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.54□□□□□ -0.4
Ndufb11O09111 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ndufb11O09111 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufb11O09111 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ndufb11O09111 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ndufb11O09111 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Ndufb11O09111 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.53□□□□□ -0.4
Ndufb11O09111 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.53□□□□□ -0.4
Ndufb11O09111 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ndufb11O09111 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.53□□□□□ -0.4
Ndufb11O09111 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.53□□□□□ -0.4
Ndufb11O09111 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufb11O09111 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufb11O09111 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufb11O09111 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufb11O09111 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufb11O09111 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufb11O09111 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufb11O09111 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufb11O09111 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufb11O09111 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufb11O09111 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufb11O09111 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufb11O09111 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufb11O09111 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufb11O09111 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufb11O09111 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufb11O09111 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufb11O09111 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufb11O09111 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufb11O09111 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufb11O09111 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufb11O09111 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.52□□□□□ -0.41
Ndufb11O09111 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ndufb11O09111 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufb11O09111 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.52□□□□□ -0.41
Ndufb11O09111 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Ndufb11O09111 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Ndufb11O09111 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.51□□□□□ -0.41
Ndufb11O09111 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Ndufb11O09111 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Ndufb11O09111 Gm5408-201ENSMUST00000197998 747 ntBASIC12.51□□□□□ -0.41
Ndufb11O09111 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.51□□□□□ -0.41
Ndufb11O09111 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ndufb11O09111 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ndufb11O09111 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms