Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm8825-201ENSMUST00000182565 998 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm4518-201ENSMUST00000182638 718 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm44454-201ENSMUST00000198541 138 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Tnfrsf11bO08712 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Gm13836-201ENSMUST00000121159 501 ntBASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Tnfrsf11bO08712 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Sybu-209ENSMUST00000228639 4113 ntBASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfrsf11bO08712 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tnfrsf11bO08712 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tnfrsf11bO08712 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms