Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Raet1bO08603 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.83□□□□□ -0.19
Raet1bO08603 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Raet1bO08603 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Raet1bO08603 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Raet1bO08603 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Gm4459-201ENSMUST00000118750 468 ntBASIC13.83□□□□□ -0.2
Raet1bO08603 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.83□□□□□ -0.2
Raet1bO08603 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.83□□□□□ -0.2
Raet1bO08603 Gm21362-201ENSMUST00000194272 928 ntBASIC13.83□□□□□ -0.2
Raet1bO08603 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.83□□□□□ -0.2
Raet1bO08603 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Raet1bO08603 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Raet1bO08603 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.82□□□□□ -0.2
Raet1bO08603 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.82□□□□□ -0.2
Raet1bO08603 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.82□□□□□ -0.2
Raet1bO08603 Gm12644-201ENSMUST00000119935 606 ntBASIC13.82□□□□□ -0.2
Raet1bO08603 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.82□□□□□ -0.2
Raet1bO08603 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.82□□□□□ -0.2
Raet1bO08603 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Raet1bO08603 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Raet1bO08603 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.82□□□□□ -0.2
Raet1bO08603 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.82□□□□□ -0.2
Raet1bO08603 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Raet1bO08603 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Raet1bO08603 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.81□□□□□ -0.2
Raet1bO08603 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Raet1bO08603 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.81□□□□□ -0.2
Raet1bO08603 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.81□□□□□ -0.2
Raet1bO08603 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.81□□□□□ -0.2
Raet1bO08603 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Raet1bO08603 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Raet1bO08603 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.81□□□□□ -0.2
Raet1bO08603 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.81□□□□□ -0.2
Raet1bO08603 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Raet1bO08603 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.81□□□□□ -0.2
Raet1bO08603 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Raet1bO08603 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Raet1bO08603 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Raet1bO08603 Asic1-205ENSMUST00000228185 1818 ntBASIC13.8□□□□□ -0.2
Raet1bO08603 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Raet1bO08603 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Raet1bO08603 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Raet1bO08603 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.8□□□□□ -0.2
Raet1bO08603 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Raet1bO08603 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Raet1bO08603 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms