Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.74■□□□□ 0.11
AlyrefO08583 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
AlyrefO08583 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
AlyrefO08583 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.74■□□□□ 0.11
AlyrefO08583 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.74■□□□□ 0.11
AlyrefO08583 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
AlyrefO08583 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.74■□□□□ 0.11
AlyrefO08583 Gm11478-201ENSMUST00000117851 599 ntBASIC15.74■□□□□ 0.11
AlyrefO08583 Gm14928-201ENSMUST00000120198 477 ntBASIC15.74■□□□□ 0.11
AlyrefO08583 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.74■□□□□ 0.11
AlyrefO08583 Gm24158-201ENSMUST00000175263 71 ntBASIC15.74■□□□□ 0.11
AlyrefO08583 Gm27301-201ENSMUST00000184012 127 ntBASIC15.74■□□□□ 0.11
AlyrefO08583 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.74■□□□□ 0.11
AlyrefO08583 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
AlyrefO08583 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
AlyrefO08583 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.74■□□□□ 0.11
AlyrefO08583 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AlyrefO08583 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
AlyrefO08583 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
AlyrefO08583 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.73■□□□□ 0.11
AlyrefO08583 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.73■□□□□ 0.11
AlyrefO08583 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.73■□□□□ 0.11
AlyrefO08583 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
AlyrefO08583 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.73■□□□□ 0.11
AlyrefO08583 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.73■□□□□ 0.11
AlyrefO08583 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.73■□□□□ 0.11
AlyrefO08583 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.73■□□□□ 0.11
AlyrefO08583 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.73■□□□□ 0.11
AlyrefO08583 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Gm9172-201ENSMUST00000212092 954 ntBASIC15.73■□□□□ 0.11
AlyrefO08583 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.73■□□□□ 0.11
AlyrefO08583 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
AlyrefO08583 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.73■□□□□ 0.11
AlyrefO08583 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
AlyrefO08583 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AlyrefO08583 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.72■□□□□ 0.11
AlyrefO08583 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.72■□□□□ 0.11
AlyrefO08583 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.72■□□□□ 0.11
AlyrefO08583 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.72■□□□□ 0.11
AlyrefO08583 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.72■□□□□ 0.11
AlyrefO08583 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.72■□□□□ 0.11
AlyrefO08583 Gm27306-201ENSMUST00000183970 107 ntBASIC15.72■□□□□ 0.11
AlyrefO08583 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Gm28631-201ENSMUST00000190740 334 ntBASIC15.72■□□□□ 0.11
AlyrefO08583 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.72■□□□□ 0.11
AlyrefO08583 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.72■□□□□ 0.11
AlyrefO08583 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AlyrefO08583 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms