Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa8J3QNX5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Gm26039-201ENSMUST00000158152 144 ntBASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa8J3QNX5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa8J3QNX5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Gm13474-201ENSMUST00000122466 815 ntBASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms