Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Gm10849-201ENSMUST00000100397 618 ntBASIC13.3□□□□□ -0.28
Gm3727J3QM54 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.3□□□□□ -0.28
Gm3727J3QM54 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.3□□□□□ -0.28
Gm3727J3QM54 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.29□□□□□ -0.28
Gm3727J3QM54 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Gm38027-201ENSMUST00000192315 235 ntBASIC13.29□□□□□ -0.28
Gm3727J3QM54 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gm3727J3QM54 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3727J3QM54 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Gm3727J3QM54 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Gm27405-201ENSMUST00000184201 112 ntBASIC13.28□□□□□ -0.28
Gm3727J3QM54 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.28□□□□□ -0.28
Gm3727J3QM54 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gm3727J3QM54 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3727J3QM54 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Gm3727J3QM54 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3727J3QM54 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3727J3QM54 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.27□□□□□ -0.28
Gm3727J3QM54 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3727J3QM54 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.27□□□□□ -0.28
Gm3727J3QM54 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3727J3QM54 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3727J3QM54 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3727J3QM54 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3727J3QM54 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3727J3QM54 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3727J3QM54 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3727J3QM54 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3727J3QM54 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3727J3QM54 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms