Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Gm42693-201ENSMUST00000196779 631 ntBASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc188F6WEU2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Gm15198-201ENSMUST00000117283 177 ntBASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Gm18624-201ENSMUST00000220966 658 ntBASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc188F6WEU2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Gm6257-201ENSMUST00000163864 910 ntBASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc188F6WEU2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Gm10499-201ENSMUST00000174094 934 ntBASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc188F6WEU2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc188F6WEU2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms