Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ube4aE9Q735 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4aE9Q735 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4aE9Q735 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4aE9Q735 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4aE9Q735 Gm44335-201ENSMUST00000196879 141 ntBASIC18.66■□□□□ 0.58
Ube4aE9Q735 Gm44297-201ENSMUST00000198304 141 ntBASIC18.66■□□□□ 0.58
Ube4aE9Q735 Gm44346-201ENSMUST00000198851 141 ntBASIC18.66■□□□□ 0.58
Ube4aE9Q735 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4aE9Q735 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4aE9Q735 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4aE9Q735 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4aE9Q735 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4aE9Q735 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4aE9Q735 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4aE9Q735 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ube4aE9Q735 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.66■□□□□ 0.58
Ube4aE9Q735 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.65■□□□□ 0.58
Ube4aE9Q735 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.65■□□□□ 0.58
Ube4aE9Q735 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ube4aE9Q735 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.64■□□□□ 0.58
Ube4aE9Q735 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ube4aE9Q735 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
Ube4aE9Q735 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Gm5312-201ENSMUST00000203728 547 ntBASIC18.64■□□□□ 0.57
Ube4aE9Q735 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.64■□□□□ 0.57
Ube4aE9Q735 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.64■□□□□ 0.57
Ube4aE9Q735 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Rprl2-201ENSMUST00000157150 290 ntBASIC18.63■□□□□ 0.57
Ube4aE9Q735 Gm10576-201ENSMUST00000191927 825 ntBASIC18.63■□□□□ 0.57
Ube4aE9Q735 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4aE9Q735 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms