Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Gm27300-201ENSMUST00000184085 97 ntBASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Gm27335-201ENSMUST00000184758 97 ntBASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb9E9Q5G2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb9E9Q5G2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Gm7787-201ENSMUST00000216858 688 ntBASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms