Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpsf4lE9Q2N0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpsf4lE9Q2N0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpsf4lE9Q2N0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpsf4lE9Q2N0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cpsf4lE9Q2N0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpsf4lE9Q2N0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpsf4lE9Q2N0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Cpsf4lE9Q2N0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Gm5864-201ENSMUST00000202263 970 ntBASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.2□□□□□ -0.3
Cpsf4lE9Q2N0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Gm25990-201ENSMUST00000102440 86 ntBASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Gm15358-201ENSMUST00000119249 520 ntBASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Mir8098-201ENSMUST00000184011 137 ntBASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf4lE9Q2N0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms