Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm2495-201ENSMUST00000191160 466 ntBASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gm5363-201ENSMUST00000211927 938 ntBASIC8.63□□□□□ -1.03
Herc1E9PZP8 AC139580.1-202ENSMUST00000223574 928 ntBASIC8.63□□□□□ -1.03
Herc1E9PZP8 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Gm43118-201ENSMUST00000199149 775 ntBASIC8.63□□□□□ -1.03
Herc1E9PZP8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Herc1E9PZP8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Gm14722-201ENSMUST00000118943 689 ntBASIC8.62□□□□□ -1.03
Herc1E9PZP8 Rps4l-202ENSMUST00000204242 789 ntBASIC8.62□□□□□ -1.03
Herc1E9PZP8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Gm38000-201ENSMUST00000192390 1215 ntBASIC8.62□□□□□ -1.03
Herc1E9PZP8 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC8.62□□□□□ -1.03
Herc1E9PZP8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Gm22323-201ENSMUST00000103832 109 ntBASIC8.62□□□□□ -1.03
Herc1E9PZP8 Gm13047-201ENSMUST00000117116 815 ntBASIC8.62□□□□□ -1.03
Herc1E9PZP8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Gm18893-201ENSMUST00000198416 943 ntBASIC8.62□□□□□ -1.03
Herc1E9PZP8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC8.62□□□□□ -1.03
Herc1E9PZP8 AC158538.2-201ENSMUST00000225455 906 ntBASIC8.62□□□□□ -1.03
Herc1E9PZP8 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Herc1E9PZP8 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC8.62□□□□□ -1.03
Herc1E9PZP8 Gm43758-201ENSMUST00000199500 367 ntBASIC8.62□□□□□ -1.03
Herc1E9PZP8 Gm13050-201ENSMUST00000122149 1345 ntBASIC8.61□□□□□ -1.03
Herc1E9PZP8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC8.61□□□□□ -1.03
Herc1E9PZP8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC8.61□□□□□ -1.03
Herc1E9PZP8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC8.61□□□□□ -1.03
Herc1E9PZP8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC8.61□□□□□ -1.03
Herc1E9PZP8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Gm46209-201ENSMUST00000217912 553 ntBASIC8.61□□□□□ -1.03
Herc1E9PZP8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Gm9333-201ENSMUST00000205452 1323 ntBASIC8.61□□□□□ -1.03
Herc1E9PZP8 Gm6203-201ENSMUST00000209575 1342 ntBASIC8.61□□□□□ -1.03
Herc1E9PZP8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Gm44207-201ENSMUST00000204568 1424 ntBASIC8.61□□□□□ -1.03
Herc1E9PZP8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Herc1E9PZP8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Gm19184-201ENSMUST00000196798 928 ntBASIC8.6□□□□□ -1.03
Herc1E9PZP8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms