Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Gm11543-201ENSMUST00000120758 370 ntBASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Gm27533-201ENSMUST00000183800 152 ntBASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Gm44344-201ENSMUST00000200287 129 ntBASIC21.54■■□□□ 1.04
Scaf11E9PZM7 AC149294.4-201ENSMUST00000227870 882 ntBASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC21.54■■□□□ 1.04
Scaf11E9PZM7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Gm23984-201ENSMUST00000157139 203 ntBASIC21.53■■□□□ 1.04
Scaf11E9PZM7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Rassf8-202ENSMUST00000058538 1131 ntBASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scaf11E9PZM7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Gm18766-201ENSMUST00000189811 808 ntBASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Gm8515-201ENSMUST00000194852 576 ntBASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Gm18049-201ENSMUST00000208909 581 ntBASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Gm45384-201ENSMUST00000210451 277 ntBASIC21.52■■□□□ 1.04
Scaf11E9PZM7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scaf11E9PZM7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Scaf11E9PZM7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Scaf11E9PZM7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Scaf11E9PZM7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Scaf11E9PZM7 Gm10499-201ENSMUST00000174094 934 ntBASIC21.52■■□□□ 1.03
Scaf11E9PZM7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC21.52■■□□□ 1.03
Scaf11E9PZM7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC21.52■■□□□ 1.03
Scaf11E9PZM7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Scaf11E9PZM7 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Scaf11E9PZM7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Scaf11E9PZM7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Mir6420-201ENSMUST00000185032 102 ntBASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Gm18062-201ENSMUST00000208020 547 ntBASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Gm18055-201ENSMUST00000208254 547 ntBASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scaf11E9PZM7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Mir1938-201ENSMUST00000158746 100 ntBASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scaf11E9PZM7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms