Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx8D3YU81 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.53■□□□□ 0.24
Rfx8D3YU81 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx8D3YU81 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx8D3YU81 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx8D3YU81 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfx8D3YU81 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx8D3YU81 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx8D3YU81 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx8D3YU81 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfx8D3YU81 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfx8D3YU81 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx8D3YU81 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx8D3YU81 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.52■□□□□ 0.24
Rfx8D3YU81 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.52■□□□□ 0.24
Rfx8D3YU81 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.52■□□□□ 0.24
Rfx8D3YU81 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx8D3YU81 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx8D3YU81 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx8D3YU81 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.52■□□□□ 0.23
Rfx8D3YU81 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx8D3YU81 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx8D3YU81 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx8D3YU81 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx8D3YU81 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx8D3YU81 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx8D3YU81 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx8D3YU81 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx8D3YU81 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.5■□□□□ 0.23
Rfx8D3YU81 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.5■□□□□ 0.23
Rfx8D3YU81 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.5■□□□□ 0.23
Rfx8D3YU81 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx8D3YU81 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rfx8D3YU81 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rfx8D3YU81 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx8D3YU81 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Rfx8D3YU81 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx8D3YU81 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rfx8D3YU81 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx8D3YU81 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx8D3YU81 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx8D3YU81 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx8D3YU81 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx8D3YU81 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Rfx8D3YU81 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Rfx8D3YU81 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.49■□□□□ 0.23
Rfx8D3YU81 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.49■□□□□ 0.23
Rfx8D3YU81 Gm8097-201ENSMUST00000117903 829 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms