Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp42B2RQC2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.21■□□□□ 0.51
Usp42B2RQC2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Usp42B2RQC2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Usp42B2RQC2 Asic1-205ENSMUST00000228185 1818 ntBASIC18.21■□□□□ 0.5
Usp42B2RQC2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Usp42B2RQC2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.19■□□□□ 0.5
Usp42B2RQC2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.19■□□□□ 0.5
Usp42B2RQC2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp42B2RQC2 Gm7461-201ENSMUST00000058918 827 ntBASIC18.19■□□□□ 0.5
Usp42B2RQC2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.18■□□□□ 0.5
Usp42B2RQC2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.18■□□□□ 0.5
Usp42B2RQC2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.18■□□□□ 0.5
Usp42B2RQC2 Gm8318-201ENSMUST00000182954 872 ntBASIC18.18■□□□□ 0.5
Usp42B2RQC2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Gm37153-201ENSMUST00000193637 231 ntBASIC18.18■□□□□ 0.5
Usp42B2RQC2 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.18■□□□□ 0.5
Usp42B2RQC2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp42B2RQC2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp42B2RQC2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms