Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Gm6888-201ENSMUST00000221983 706 ntBASIC15.88■□□□□ 0.13
Col4a6B1AVK5 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.88■□□□□ 0.13
Col4a6B1AVK5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a6B1AVK5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Gm15487-201ENSMUST00000122373 465 ntBASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Gm27533-201ENSMUST00000183800 152 ntBASIC15.86■□□□□ 0.13
Col4a6B1AVK5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Gm9063-201ENSMUST00000223299 582 ntBASIC15.86■□□□□ 0.13
Col4a6B1AVK5 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a6B1AVK5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Gm18766-201ENSMUST00000189811 808 ntBASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.85■□□□□ 0.13
Col4a6B1AVK5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms