Protein–RNA interactions for Protein: A2BFR3

H2al1j, Histone H2A, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1jA2BFR3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2al1jA2BFR3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2al1jA2BFR3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2al1jA2BFR3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2al1jA2BFR3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2al1jA2BFR3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2al1jA2BFR3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2al1jA2BFR3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
H2al1jA2BFR3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Gm12134-201ENSMUST00000122109 520 ntBASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2al1jA2BFR3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.18□□□□□ -0.46
H2al1jA2BFR3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Gm29707-201ENSMUST00000196325 491 ntBASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2al1jA2BFR3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms