Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.27■□□□□ 0.2
Scn1aA2APX8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Gm10499-201ENSMUST00000174094 934 ntBASIC16.27■□□□□ 0.2
Scn1aA2APX8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Mir8117-201ENSMUST00000184773 107 ntBASIC16.27■□□□□ 0.2
Scn1aA2APX8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn1aA2APX8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn1aA2APX8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn1aA2APX8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn1aA2APX8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Scn1aA2APX8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn1aA2APX8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.26■□□□□ 0.19
Scn1aA2APX8 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.26■□□□□ 0.19
Scn1aA2APX8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.26■□□□□ 0.19
Scn1aA2APX8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.26■□□□□ 0.19
Scn1aA2APX8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.26■□□□□ 0.19
Scn1aA2APX8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scn1aA2APX8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Gm27301-201ENSMUST00000184012 127 ntBASIC16.25■□□□□ 0.19
Scn1aA2APX8 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.25■□□□□ 0.19
Scn1aA2APX8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.25■□□□□ 0.19
Scn1aA2APX8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn1aA2APX8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn1aA2APX8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.24■□□□□ 0.19
Scn1aA2APX8 Gm27702-201ENSMUST00000184512 56 ntBASIC16.24■□□□□ 0.19
Scn1aA2APX8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.24■□□□□ 0.19
Scn1aA2APX8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Gm37935-201ENSMUST00000192012 982 ntBASIC16.24■□□□□ 0.19
Scn1aA2APX8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scn1aA2APX8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms