Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gm28911-201ENSMUST00000188837 117 ntBASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gm7561-201ENSMUST00000211203 886 ntBASIC8.12□□□□□ -1.11
Ubr4A2AN08 CT025551.1-201ENSMUST00000223996 692 ntBASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gm9333-201ENSMUST00000205452 1323 ntBASIC8.12□□□□□ -1.11
Ubr4A2AN08 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gm10766-202ENSMUST00000194123 606 ntBASIC8.12□□□□□ -1.11
Ubr4A2AN08 AC154595.3-201ENSMUST00000224579 384 ntBASIC8.12□□□□□ -1.11
Ubr4A2AN08 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC8.12□□□□□ -1.11
Ubr4A2AN08 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ubr4A2AN08 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Gm27847-201ENSMUST00000183711 107 ntBASIC8.11□□□□□ -1.11
Ubr4A2AN08 Gm27375-201ENSMUST00000183799 107 ntBASIC8.11□□□□□ -1.11
Ubr4A2AN08 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 AC090659.2-201ENSMUST00000225378 1186 ntBASIC8.11□□□□□ -1.11
Ubr4A2AN08 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Gm26083-201ENSMUST00000157904 193 ntBASIC8.11□□□□□ -1.11
Ubr4A2AN08 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Gm8096-201ENSMUST00000209921 1591 ntBASIC8.11□□□□□ -1.11
Ubr4A2AN08 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Trav4d-2-201ENSMUST00000120914 335 ntBASIC8.11□□□□□ -1.11
Ubr4A2AN08 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 CT573034.1-201ENSMUST00000222983 313 ntBASIC8.11□□□□□ -1.11
Ubr4A2AN08 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ubr4A2AN08 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Gm5363-201ENSMUST00000211927 938 ntBASIC8.1□□□□□ -1.11
Ubr4A2AN08 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ubr4A2AN08 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms