Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm27357-201ENSMUST00000183754 135 ntBASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm27742-201ENSMUST00000184667 60 ntBASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm17807-201ENSMUST00000186869 298 ntBASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgb8A0A140LI48 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm18669-201ENSMUST00000216049 778 ntBASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.12□□□□□ -0.15
Pcdhgb8A0A140LI48 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhgb8A0A140LI48 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhgb8A0A140LI48 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhgb8A0A140LI48 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhgb8A0A140LI48 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms