Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Phf7-203ENSMUST00000226565 1971 ntBASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9d-4A0A0G2JG37 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav9d-4A0A0G2JG37 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav9d-4A0A0G2JG37 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm14026-201ENSMUST00000120625 1789 ntBASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm16425-201ENSMUST00000118143 3130 ntBASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9d-4A0A0G2JG37 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Zfp264-201ENSMUST00000208656 1563 ntBASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm7712-202ENSMUST00000222331 1510 ntBASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm38327-201ENSMUST00000195852 1755 ntBASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms