Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.77□□□□□ -0.52
Trbv30A0A0B4J1P1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm24589-201ENSMUST00000116692 94 ntBASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm4459-201ENSMUST00000118750 468 ntBASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm17971-201ENSMUST00000190239 806 ntBASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv30A0A0B4J1P1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv30A0A0B4J1P1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm27459-201ENSMUST00000184860 107 ntBASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.75□□□□□ -0.53
Trbv30A0A0B4J1P1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms