Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ighv1-47A0A0A6YY41 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Gm15794-201ENSMUST00000120182 631 ntBASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ighv1-47A0A0A6YY41 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ighv1-47A0A0A6YY41 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ighv1-47A0A0A6YY41 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ighv1-47A0A0A6YY41 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ighv1-47A0A0A6YY41 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ighv1-47A0A0A6YY41 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms