Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-4A0A075B6B4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6-4A0A075B6B4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Sybu-209ENSMUST00000228639 4113 ntBASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-4A0A075B6B4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Gm24589-201ENSMUST00000116692 94 ntBASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Gm7153-201ENSMUST00000117092 455 ntBASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Gm17971-201ENSMUST00000190239 806 ntBASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Gm18622-201ENSMUST00000219361 595 ntBASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-4A0A075B6B4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Gm27459-201ENSMUST00000184860 107 ntBASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Gm34391-201ENSMUST00000203706 907 ntBASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 AC127302.2-201ENSMUST00000215212 268 ntBASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 AC117588.1-201ENSMUST00000228510 999 ntBASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Prob1-201ENSMUST00000097619 3021 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms